Dataset Overview
Assembly Summary (reference cultivars & mango pangenome)
| Feature |
Alphonso
GCF_011075055.1
|
Amrapali
GCA_020138855.1
|
Neelam
GCA_021014495.1
|
Dashehari
GCA_021014955.1
|
Mango Pangenome
This study
|
| Genome / assembly size |
392 Mb |
411.3 Mb |
370.6 Mb |
368.8 Mb |
394.43 Mb |
| Chromosomes |
20 |
20 |
20 |
20 |
20 |
| Scaffolds / contigs |
250 scaffolds |
3,106 scaffolds |
2,293 scaffolds |
2,247 scaffolds |
2,295 contigs |
| Scaffold / contig N50 |
17.7 Mb |
12.1 Mb |
18.2 Mb |
18.1 Mb |
17.65 Mb |
| GC % |
32.5% |
32.5% |
32.5% |
33% |
32.71% |
| Assembly level |
Chromosome |
Chromosome |
Chromosome |
Chromosome |
Sequence-based pangenome |
| Data sources |
Single cultivar |
Single cultivar |
Single cultivar |
Single cultivar |
40 cultivars |
